Data quality metrics extracted from 4h5j.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4H5J at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X29A
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X29A
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-10-01
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792, 0.9794, 0.9640
Software
Data collection
_software.classification
CBASS
Data reduction
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing #1
_software.classification
SHARP (Eric de La Fortelle; sharp-develop@globalphasing.com)
Phasing #2
_software.classification
SOLOMON (Jan P. Abrahams; ccp4@ccp4.ac.uk)
Refinement
_software.classification
PHENIX (dev_1144; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 64
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
189.473 189.473 53.424 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979200.979400.96400 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
100.000 100.000 2.690
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.600 5.600 2.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.120 0.072 0.446
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
34159 3556 3419
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.7 99.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.3 8.9 7.4
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4H5J
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-09-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.4 - 2.601 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1787 / 0.2164
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD