Data quality metrics extracted from 7h3q.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7H3Q at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-10-11
Detector
_diffrn_detector.type
DECTRIS EIGER2 XE 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.94055
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
REFMAC (5.8.0267)
Refinement #2
_software.classification
REFMAC5
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
86.540 56.332 32.419 90.00 95.39 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.94055 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.170 1.070
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.050 1.050
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.087 2.934
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.095 3.392
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.037 1.681
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
410183 5414
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
65344 1464
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
11.40 0.30
Completeness [%]
_reflns.percent_possible_obs
90.6 -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.3 3.7
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.280

Refinement
PDB entry ID
_entry.id
7H3Q
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-04-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.1 - 1.050 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1746 / 0.1946
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given