Data quality metrics extracted from 7gxs.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7GXS at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I24
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I24
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-07-31
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9686
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
Aimless (0.5.32; 29/03/17; Phil Evans)
Phasing
_software.classification
BUSTER (2.10.3; Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement
_software.classification
BUSTER (2.10.3; Gerard Bricogne; buster-develop@GlobalPhasing.com)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
67.51 67.51 165.55 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96860 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
33.780 33.780 1.890
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.850 9.060 1.850
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.070 0.024 0.472
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.074 0.026 0.498
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.023 0.010 0.151
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
180708 1514 11183
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
19958 236 1204
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
15.40 39.80 4.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 98.8 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
9.1 6.4 9.3
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.925

Refinement
PDB entry ID
_entry.id
7GXS
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-01-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
33.8 - 1.850 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1810 / 0.2180
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS