Data quality metrics extracted from 7gxk.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7GXK at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I24
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I24
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-07-31
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9686
Software
Data reduction
_software.classification
Aimless (0.5.32; 29/03/17; Phil Evans)
Data scaling
_software.classification
Aimless (0.5.32; 29/03/17; Phil Evans)
Phasing
_software.classification
BUSTER (2.10.3; Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement
_software.classification
BUSTER (2.10.3; Gerard Bricogne; buster-develop@GlobalPhasing.com)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
67.74 67.74 166.66 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96860 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
33.970 33.970 2.000
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.950 8.940 1.950
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.114 0.047 1.476
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.121 0.051 1.563
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.040 0.018 0.510
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
155147 1608 11011
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
17363 245 1194
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
9.40 27.00 1.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 98.9 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.9 6.6 9.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.998 0.686

Refinement
PDB entry ID
_entry.id
7GXK
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-01-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.0 - 1.950 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1790 / 0.2060
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS