Data quality metrics extracted from 6gxf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6GXF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PETRA III, DESY BEAMLINE P11
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
PETRA III, DESY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
P11
Temperature [K]
_diffrn.ambient_temp
293
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-05-01
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.00890
Software
Data reduction
_software.classification
XDS (nXDS)
Data scaling
_software.classification
XSCALE (nXSCALE)
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.12_2829: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
41.32 78.54 83.56 90.00 102.92 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00890 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
81.420 1.830
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.800 1.800
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
48178 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
2.90 -
Completeness [%]
_reflns.percent_possible_obs
99.8 -
Multiplicity
_reflns.pdbx_redundancy
9.2 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
6GXF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-06-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
40.7 - 1.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2219 / 0.2690
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3r3u