Data quality metrics extracted from 2gv5.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2GV5 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-03-11
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9797, 0.9799, 0.9184
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
CCP4 (SCALA)
Phasing #1
_software.classification
SnB
Phasing #2
_software.classification
SHARP
Refinement
_software.classification
REFMAC (5.2.0005)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
74.775 104.735 184.899 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979700.979900.91840 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
92.450 3.160
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.000 3.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.097 0.470
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
34711 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
5.40 1.60
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.3 7.4
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2GV5
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2006-05-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
92.5 - 3.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2531 / 0.2965
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD