Data quality metrics extracted from 6gut.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6GUT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID29
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID29
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2012-06-14
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97625
Software
Data reduction
_software.classification
XDS (March 15th 2012)
Data scaling #1
_software.classification
XSCALE (March 15th 2012)
Data scaling #2
_software.classification
SCALA (3.3.16)
Phasing
_software.classification
PHASER (2.3.0)
Refinement
_software.classification
REFMAC (5.6.0117)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
128.618 83.458 59.049 90.00 102.52 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97625 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.244 47.244 1.690
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.630 6.310 1.630
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.062 0.046 0.543
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.074 0.055 0.649
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.039 0.029 0.351
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
75506 1349 7386
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.40 11.70 1.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.5 98.8 99.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.4 3.3 3.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
6GUT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-06-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 1.630 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1774 / 0.2090
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
IN-HOUSE