Data quality metrics extracted from 2gno.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2GNO at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL11-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL11-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-12-18
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979224, 0.918370, 0.978940
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Phasing
_software.classification
SHARP (V. 1)
Refinement
_software.classification
REFMAC (5.2.0005; Murshudov, G.N.; ccp4@dl.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 4
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
135.56 135.56 35.56 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979220.918370.97894 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
27.900 27.900 2.070
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.000 3.420 2.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.041 0.025 0.415
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 7896 6860
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
22105 4199 3580
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
11.88 25.10 2.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.7 99.1 83.8
  Multiplicity - - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
2GNO
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2006-04-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
27.9 - 2.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2200 / 0.2780
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD