Data quality metrics extracted from 7gm2.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7GM2 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-09-17
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.91788
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.10.4 (20-OCT-2021))
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
68.080 100.760 104.258 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91788 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
72.453 2.127
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.891 1.891
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.156 1.223
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.169 1.333
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.065 0.524
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
219894 10512
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
33156 1659
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
7.80 1.50
Completeness [%]
_reflns.percent_possible_obs
57.2 -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.6 6.3
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
7GM2
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-08-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.0 - 1.891 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2096 / 0.2441
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given