Data quality metrics extracted from 2ghr.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2GHR at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL1-5
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL1-5
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2006-02-14
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.918381, 0.979094,0.978532
Software
Data reduction
_software.classification
MOSFLM
Data scaling #1
_software.classification
SCALA (Phil Evans; pre@mrc-lmb.cam.ac.uk)
Data scaling #2
_software.classification
CCP4 (SCALA)
Phasing
_software.classification
SHARP
Refinement
_software.classification
REFMAC (5.2.0005; Murshudov, G.N.; ccp4@dl.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
95.890 95.890 75.403 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.918380.979090.97853 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.640 29.640 2.460
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 10.730 2.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.124 0.035 0.592
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 190 1038
Total number unique
_reflns.number_obs
14274 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
4.60 17.30 1.30
Completeness [%]
_reflns.percent_possible_obs
99.8 - -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.6 5.5 6.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
2GHR
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2006-03-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
30.0 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1880 / 0.2500
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD