Data quality metrics extracted from 9gfu.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9GFU at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE MASSIF-3
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MASSIF-3
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-09-28
Detector
_diffrn_detector.type
DECTRIS EIGER X 4M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.967697
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
MOLREP
Model building
_software.classification
Coot
Refinement
_software.classification
PHENIX (version 1.21.2-5419)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
94.749 61.792 119.309 90.000 101.726 90.000
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96770 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
45.230 2.160
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.100 2.100
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
38004 3118
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.60 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.1 96.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.6 7.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.990 0.930

Refinement
PDB entry ID
_entry.id
9GFU
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-08-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
45.2 - 2.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2117 / 0.2496
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given