Data quality metrics extracted from 4gdo.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4GDO at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
BRUKER AXS MICROSTAR-H
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2012-04-01
Detector
_diffrn_detector.type
MAR scanner 345 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data collection
_software.classification
MAR345dtb
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
Arcimboldo
Refinement
_software.classification
PHENIX (phenix.refine: dev_1117)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
90.62 35.87 75.69 90.00 94.11 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
77.000 1.740
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.700
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
23087 1381
<I/σ(I)>
_reflns_shell.meanI_over_sigI_obs
- 3.52
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
85.3 68.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.1 2.1
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
4GDO
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-08-01
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
45.2 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2127 / 0.2484
Structure solution method
_refine.pdbx_method_to_determine_struct
AB INITIO PHASING