Data quality metrics extracted from 1gdv.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1GDV at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL44B2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL44B2
Temperature [K]
_diffrn.ambient_temp
293.0
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2000-06-20
Detector
_diffrn_detector.type
MAR CCD 165 mm
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
CCP4 (SCALA)
Phasing
_software.classification
X-PLOR
Model building
_software.classification
X-PLOR
Refinement
_software.classification
X-PLOR (3.851)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
49.26 49.26 83.45 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.70000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.000 1.650
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.570 1.570
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.047 0.347
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
14083 2054
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.20 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.7 95.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.5 7.5
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
1GDV
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2000-10-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 1.570 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1990 / 0.2540