Data quality metrics extracted from 6fyi.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6FYI at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-03-15
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.00003
Software
Data reduction
_software.classification
XDS (Wolfgang Kabsch; Wolfgang.Kabsch@mpimf-heidelberg.mpg.de)
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Phasing
_software.classification
PHASER (Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
39.444 76.531 111.840 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00003 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.460
High resolution limit [Å]
_reflns.d_resolution_high
2.600
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.140
Rmeas
_reflns.pdbx_Rrim_I_all
0.153
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
10909
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.90
Completeness [%]
_reflns.percent_possible_obs
99.5
Multiplicity
_reflns.pdbx_redundancy
6.3
CC(1/2)
_reflns.pdbx_CC_half
0.994

Refinement
PDB entry ID
_entry.id
6FYI
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-03-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.5 - 2.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2178 / 0.2330
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3NR9