Experiment | |
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Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | MAD SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | SYNCHROTRON The general class of the radiation source. |
Source details _diffrn_source.type | APS BEAMLINE 23-ID-B The make, model or name of the source of radiation. |
Synchrotron site _diffrn_source.pdbx_synchrotron_site | APS Synchrotron site. |
Beamline _diffrn_source.pdbx_synchrotron_beamline | 23-ID-B Synchrotron beamline. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | CCD The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2008-10-12 The date of data collection. |
Detector _diffrn_detector.type | MARMOSAIC 300 mm CCD The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 0.97966, 0.94645 Comma separated list of wavelengths or wavelength range. |
Software | |
Data collection _software.classification | MAR345 (CCD) The classification of the program according to its |
Data reduction _software.classification | MOSFLM (7.0.1; A.G.W. Leslie; andrew@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Data scaling _software.classification | SCALA (3.2.5; 5/04/2004; Phil R. Evans; pre@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Phasing #1 _software.classification | SHELX (George M. Sheldrick; gsheldr@shelx.uni-ac.gwdg.de) The classification of the program according to its |
Phasing #2 _software.classification | SHARP (2.2.0; de La Fortelle; sharp-develop@globalphasing.com) The classification of the program according to its |
Phasing #3 _software.classification | PHASER (1.3.3; R. J. Read; cimr-phaser@lists.cam.ac.uk) The classification of the program according to its |
Phasing #4 _software.classification | SHELXD The classification of the program according to its |
Phasing #5 _software.classification | autoSHARP The classification of the program according to its |
Model building _software.classification | MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu) The classification of the program according to its |
Refinement _software.classification | REFMAC (5.5.0053; Garib N. Murshudov; garib@ysbl.york.ac.uk) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 31 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 57.944 Unit-cell length a corresponding to the structure reported in 57.944 Unit-cell length b corresponding to the structure reported in 197.964 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 120.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 0.94645 The radiation wavelength in angstroms. 0.97966 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
---|---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 28.976 The largest value in angstroms for the interplanar spacings | 28.976 The highest value in angstroms for the interplanar spacings | 1.640 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 1.600 The smallest value in angstroms for the interplanar spacings | 7.160 The smallest value in angstroms for the interplanar spacings | 1.600 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.085 The R value for merging intensities satisfying the observed | 0.051 The value of Rmerge(I) for reflections classified as 'observed' | 0.652 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas | - | - | - |
Rpim | - | - | - |
Total number of observations _reflns_shell.number_measured_all | - | 8183 The total number of reflections measured for this | 23127 The total number of reflections measured for this |
Total number unique _reflns.number_obs _reflns_shell.number_unique_all | 97660 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 1084 The total number of measured reflections which are symmetry- | 7053 The total number of measured reflections which are symmetry- |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 5.73 The mean of the ratio of the intensities to their | 41.00 The ratio of the mean of the intensities of the reflections | 1.80 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 99.6 The percentage of geometrically possible reflections represented | 98.8 The percentage of geometrically possible reflections represented | 97.2 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 4.7 Overall redundancy for this data set. | 7.5 Redundancy for the current shell. | 3.3 Redundancy for the current shell. |
CC(1/2) | - | - | - |
Refinement | |
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PDB entry ID _entry.id | 3FXA |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2009-01-20 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 29.0 - 1.600 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1330 / 0.1570 |
Structure solution method _refine.pdbx_method_to_determine_struct | MAD + MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | WARNING: no starting model (for MR) given |