Data quality metrics extracted from 6fvi.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6FVI at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE BM14
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BM14
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-04-12
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.72932
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
Aimless (0.5.28)
Phasing
_software.classification
CRANK
Refinement
_software.classification
REFMAC
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 2 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
39.70 60.06 64.11 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.72932 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
23.030 23.030 1.020
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.000 5.390 1.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.071 0.041 1.376
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.074 0.043 1.425
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.019 0.012 0.368
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
1218883 6929 60806
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
82358 579 4108
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
18.20 45.20 2.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.8 92.0 97.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
14.8 12.0 14.8
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.678

Refinement
PDB entry ID
_entry.id
6FVI
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-03-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
23.0 - 1.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1364 / 0.1518
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD