Data quality metrics extracted from 4fvs.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4FVS at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL9-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL9-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-05-03
Detector
_diffrn_detector.type
MARMOSAIC 325 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9785,0.9792,0.91162
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA (3.3.20; Phil Evans; pre@mrc-lmb.cam.ac.uk)
Phasing
_software.classification
SOLVE (Tom Terwilliger; terwilliger@LANL.gov)
Model building
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Refinement #1
_software.classification
BUSTER-TNT (2.10.0; Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement #2
_software.classification
BUSTER (2.10.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
140.86 154.51 72.64 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.978500.979200.91162 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.830 29.830 2.770
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.700 12.070 2.700
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.079 0.036 0.664
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 1697 11871
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
44235 519 3214
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.60 17.90 1.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 91.5 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.7 3.3 3.7
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4FVS
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-06-29
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.8 - 2.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1872 / 0.2243
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD