Data quality metrics extracted from 7fna.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7FNA at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
MAX IV BEAMLINE BioMAX
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
MAX IV
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BioMAX
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2020-05-02
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.999900
Software
Data processing
_software.classification
xdsapp (3.1.5d; 5. March 2022)
Data reduction
_software.classification
XDS (Jan 10, 2022; 11-May-2022)
Data scaling
_software.classification
Aimless ()
Phasing
_software.classification
PHENIX (1.17.1_3660)
Refinement
_software.classification
PHENIX (1.17.1_3660)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
89.142 81.276 93.195 90.00 108.47 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.99990 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
44.200 44.200 44.200
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.690 5.030 1.690
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.064 2.620
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.106 0.069 2.850
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
462582 18330 68801
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
70090 2753 10512
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.30 26.00 0.59
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.4 99.6 91.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.6 6.7 6.5
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.997 0.996 0.358

Refinement
PDB entry ID
_entry.id
7FNA
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-08-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
44.2 - 1.690 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2998 / 0.3297
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS