Data quality metrics extracted from 6fjf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6FJF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06DA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06DA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-11-25
Detector
_diffrn_detector.type
DECTRIS PILATUS 2M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.00036
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (dev_2863: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
104.373 156.739 180.956 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00036 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
49.600 2.460
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 2.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.216 2.586
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.234 2.814
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
116072 8494
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.96 0.75
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.8 6.5
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.994 0.277

Refinement
PDB entry ID
_entry.id
6FJF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-01-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.5 - 2.402 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2005 / 0.2575
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS
Starting model
_refine.pdbx_starting_model
4I4T