Data quality metrics extracted from 9fig.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9FIG at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PETRA III, DESY BEAMLINE P11
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
PETRA III, DESY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
P11
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2020-12-05
Detector
_diffrn_detector.type
DECTRIS EIGER2 X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.978564
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0419)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
48.476 80.904 100.504 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97856 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
48.480 48.480 1.420
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.400 7.670 1.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.066 0.034 1.244
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.079 0.040 1.462
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.042 0.021 0.763
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
77680 571 3783
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.80 - -
Completeness [%]
_reflns.percent_possible_obs
99.0 - -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.5 5.9 6.8
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.998 0.572

Refinement
PDB entry ID
_entry.id
9FIG
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-05-29
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.7 - 1.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1639 / 0.1939
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given