Data quality metrics extracted from 2fd3.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2FD3 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
BRUKER AXS MICROSTAR
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-11-28
Detector
_diffrn_detector.type
BRUKER SMART 6000
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction #1
_software.classification
PROTEUM PLUS (2)
Data reduction #2
_software.classification
XPREP
Data scaling #1
_software.classification
SAINT
Data scaling #2
_software.classification
SADABS
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.2.0005)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
31.138 90.041 36.326 90.00 112.99 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
18.674
High resolution limit [Å]
_reflns.d_resolution_high
2.450
Rmerge
_reflns.pdbx_Rsym_value
0.079
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
4223
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.88
Completeness [%]
_reflns.percent_possible_obs
61.9
Multiplicity
_reflns.pdbx_redundancy
1.2
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
2FD3
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2005-12-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
16.4 - 2.450 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1798 / 0.3049
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
pdb entry 2TRX_A