Data quality metrics extracted from 6f39.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6F39 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-07-09
Detector
_diffrn_detector.type
DECTRIS PILATUS3 S 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.976
Software
Data reduction
_software.classification
MOSFLM (Andrew G.W. Leslie; andrew@mrc-lmb.cam.ac.uk)
Data scaling
_software.classification
Aimless (Phil Evans)
Phasing
_software.classification
PHASER (Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
PHENIX (dev_2722)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
140.563 54.620 138.180 90.0 99.9 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97600 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
68.100 6.000
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
5.800 5.800
Rmerge
_reflns.pdbx_Rsym_value
0.320 -
  Rmeas - -
Rpim
_reflns.pdbx_Rpim_I_all
0.118 -
  Total number of observations - -
Total number unique
_reflns.number_obs
2987 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
5.10 1.80
Completeness [%]
_reflns.percent_possible_obs
99.8 -
Multiplicity
_reflns.pdbx_redundancy
15.2 -
CC(1/2)
_reflns.pdbx_CC_half
0.997 -

Refinement
PDB entry ID
_entry.id
6F39
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-11-28
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
68.1 - 5.801 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.3081 / 0.3379
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given