Data quality metrics extracted from 6f0d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6F0D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SEALED TUBE
Source details
_diffrn_source.type
BRUKER IMUS MICROFOCUS
Temperature [K]
_diffrn.ambient_temp
293.15
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2017-10-23
Detector
_diffrn_detector.type
APEX II CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54184
Software
Data collection
_software.classification
APEX 2 (2014.11-0)
Data reduction
_software.classification
SAINT (V8.18C)
Data scaling
_software.classification
SADABS (2008/1)
Phasing
_software.classification
PHASER (2.7.16)
Model building #1
_software.classification
PHENIX (1.11.1_2575)
Model building #2
_software.classification
Coot (0.8.6.1)
Refinement
_software.classification
PHENIX (1.11.1_2575)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
35.766 41.526 46.487 89.992 67.921 76.062
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54184 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
32.342 32.346 1.933
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.900 5.151 1.900
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.144 0.074 0.833
Rmeas
_reflns.pdbx_Rrim_I_all
0.150 - -
Rpim
_reflns.pdbx_Rpim_I_all
0.040 - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
18859 932 925
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
12.93 46.92 1.56
Completeness [%]
_reflns.percent_possible_obs
100.0 - -
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.1 20.0 4.8
CC(1/2)
_reflns.pdbx_CC_half
0.997 - -

Refinement
PDB entry ID
_entry.id
6F0D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-11-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.3 - 1.900 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1738 / 0.2176
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6EZW