Data quality metrics extracted from 5ezj.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EZJ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-10-11
Detector
_diffrn_detector.type
PSI PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.999930
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
64.81 72.77 109.91 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.99993 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
41.900 41.900 1.940
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.890 8.450 1.890
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.120 0.043 1.920
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.131 0.048 2.101
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
262881 3229 16595
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
41941 559 2704
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.71 25.14 1.05
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.8 98.6 86.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.3 - 6.7
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.996 0.995 0.674

Refinement
PDB entry ID
_entry.id
5EZJ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-11-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
41.9 - 1.950 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1981 / 0.2468
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5ezi