Data quality metrics extracted from 6eym.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6EYM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Method
_exptl.method
NEUTRON DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
LAUE
Source type
_diffrn_source.source
SPALLATION SOURCE
Source details
_diffrn_source.type
ORNL Spallation Neutron Source BEAMLINE MANDI
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ORNL Spallation Neutron Source
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MANDI
Temperature [K]
_diffrn.ambient_temp
298
Detector technology
_diffrn_detector.detector
AREA DETECTOR
Collection date
_diffrn_detector.pdbx_collection_date
2015-05-15
Detector
_diffrn_detector.type
ORNL ANGER CAMERA
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
2.0-4.0
Software
Data reduction #1
_software.classification
LAUEGEN
Data reduction #2
_software.classification
Mantid
Data scaling #1
_software.classification
LSCALE
Data scaling #2
_software.classification
SCALA
Data scaling #3
_software.classification
XPREP
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.12_2829: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
37.01 58.36 63.82 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.000003.350004.350002.000004.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
40.000 1.800 1.100
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.070 1.700 1.070
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.032 0.334 0.817
  Rmeas - - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.052 0.076 0.139
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
61354 1490 2172
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
24.70 3.90 2.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.4 87.9 96.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.6 4.9 4.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
1.000 - 0.772

Refinement
PDB entry ID
_entry.id
6EYM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-11-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.0 - 1.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1070 / 0.1250
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS
Starting model
_refine.pdbx_starting_model
3ZSJ