Data quality metrics extracted from 5eyx.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EYX at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
LNLS BEAMLINE D03B-MX1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
LNLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
D03B-MX1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-06-28
Detector
_diffrn_detector.type
MAR CCD 165 mm
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.47
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.10_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
145.84 41.55 94.64 90.0 102.4 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.47000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.220 46.220 2.370
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.250 7.120 2.250
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.089 0.038 0.419
Rmeas
_reflns.pdbx_Rrim_I_all
0.105 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.055 0.028 0.026
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
91499 3093 12138
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
26369 914 3639
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.80 18.50 3.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.4 99.6 93.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.5 3.4 3.3
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.993 0.999 0.873

Refinement
PDB entry ID
_entry.id
5EYX
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-11-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
35.9 - 2.250 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1858 / 0.2374