Data quality metrics extracted from 5eya.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EYA at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-09-23
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
53.047 75.779 169.101 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.490
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 5.170 2.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.179 0.066 0.743
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.191 0.070 0.821
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.066 0.024 0.331
Total number of observations
_reflns.pdbx_number_measured_all
220683 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
27181 2979 2338
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
3.90 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.2 100.0 86.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.1 8.2 4.8
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.999 0.724

Refinement
PDB entry ID
_entry.id
5EYA
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-11-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.0 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1891 / 0.2275