Data quality metrics extracted from 5ex3.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EX3 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL17U
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL17U
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-01-08
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9788
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (phenix.refine: 1.6_289)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
53.378 104.659 117.599 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97880 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 2.490
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 5.160 2.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.119 0.094 0.529
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
179578 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
26005 2783 2539
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 99.4 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.9 6.3 7.1
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5EX3
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-11-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
30.0 - 2.408 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1843 / 0.2227
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD