Data quality metrics extracted from 6ekk.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6EKK at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I24
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I24
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-02-13
Detector
_diffrn_detector.type
DECTRIS PILATUS3 S 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9686
Software
Data reduction
_software.classification
xia2
Data scaling
_software.classification
xia2
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
55.70 67.99 101.71 80.50 76.80 67.06
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96860 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.452 1.870
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.820 1.820
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
115286 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.50 -
Completeness [%]
_reflns.percent_possible_obs
95.7 -
Multiplicity
_reflns.pdbx_redundancy
3.4 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
6EKK
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-09-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
50.5 - 1.820 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1935 / 0.2323
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3TW8