Data quality metrics extracted from 9ej4.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 9EJ4 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
CHESS BEAMLINE 7B2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
CHESS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
7B2
Temperature [K]
_diffrn.ambient_temp
273
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-01-01
Detector
_diffrn_detector.type
DECTRIS EIGER2 X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1271
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
DIALS
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.20.1_4487: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
44.855 119.835 60.569 90.00 111.21 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.12710 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
120.320 1.780
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.740 1.750
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.115 0.989
Rmeas
_reflns_shell.pdbx_Rrim_I_all
- 1.098
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.125 0.462
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
58703 2297
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
9.80 0.90
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.2 76.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.7 5.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.982 0.676

Refinement
PDB entry ID
_entry.id
9EJ4
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-11-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
51.1 - 1.740 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1652 / 0.1928
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given