Data quality metrics extracted from 5eji.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EJI at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID14-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID14-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2006-09-16
Detector
_diffrn_detector.type
ADSC QUANTUM 4
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.933
Software
Data scaling
_software.classification
SCALA (3.3.21)
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 2 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
63.466 74.389 119.012 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.93300 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
63.069 63.069 2.410
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.829 7.240 2.290
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.061 0.029 0.561
Rmeas
_reflns.pdbx_Rrim_I_all
0.079 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.039 0.020 0.363
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
53269 1617 7772
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
13007 467 1884
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
12.50 12.80 1.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 99.7 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.1 3.5 4.1
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5EJI
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-11-01
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
63.1 - 2.292 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1772 / 0.2369