Data quality metrics extracted from 4ejf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4EJF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL7-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL7-1
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-08-05
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979
Software
Data scaling #1
_software.classification
SCALA (3.3.16; 2010/01/06; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Data scaling #2
_software.classification
XSCALE
Phasing
_software.classification
PHASER (Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
PHENIX (dev_713; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
128.299 105.692 91.924 90.00 106.61 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
80.148 80.148 2.790
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.640 8.370 2.640
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.086 0.021 0.456
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 4052 18785
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
34281 1117 4993
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
11.10 26.60 1.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 99.3 99.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.7 3.6 3.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4EJF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-04-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
58.9 - 2.647 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1882 / 0.2391
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 3NR2