Data quality metrics extracted from 5egv.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EGV at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL11-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL11-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2012-07-31
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.000
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
55.51 81.99 58.62 90.0 110.6 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.910
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.860 7.750 2.860
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.170 0.093 0.748
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
72627 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
11331 592 581
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
4.40 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.8 98.3 99.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.4 6.1 6.6
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5EGV
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-10-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.8 - 2.863 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2191 / 0.2764