Data quality metrics extracted from 5eff.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EFF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
BRUKER AXS MICROSTAR
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2013-05-24
Detector
_diffrn_detector.type
MAR scanner 345 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data reduction
_software.classification
SCALA
Data scaling
_software.classification
SCALA (3.3.21)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0049)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
52.62 67.71 181.54 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
90.770 18.146 2.330
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.227 7.000 2.210
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.098 0.068 0.196
Rmeas
_reflns.pdbx_Rrim_I_all
0.103 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.033 0.024 0.065
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
289522 10025 30296
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
31730 1116 3685
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
17.40 8.00 3.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.5 94.4 77.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
9.1 9.0 8.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5EFF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-10-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
90.8 - 2.230 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1785 / 0.2402