Data quality metrics extracted from 3edc.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3EDC at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
EMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
EMBL/DESY, HAMBURG
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X11
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2001-01-01
Detector
_diffrn_detector.type
MAR scanner 300 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.93
Software
Data collection
_software.classification
HKL-2000
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
PHASES
Refinement
_software.classification
REFMAC (5.2.0005)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
164.150 72.434 130.566 90.00 113.96 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.93000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
119.400
High resolution limit [Å]
_reflns.d_resolution_high
2.100
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
81956
  <I/σ(I)> -
Completeness [%]
_reflns.percent_possible_obs
100.0
Multiplicity
_reflns.pdbx_redundancy
5.9
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
3EDC
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-09-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
60.1 - 2.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1564 / 0.2013
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1LBH