Data quality metrics extracted from 5ecf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5ECF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SOLEIL BEAMLINE PROXIMA 1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SOLEIL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PROXIMA 1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-06-28
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.99187
Software
Data collection
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER (2.5.2)
Refinement
_software.classification
REFMAC (5.8.0123)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
65.675 104.274 108.103 90.00 97.44 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.99187 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.690
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.600 5.601 2.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.074 0.050 0.390
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
153960 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
42305 4520 3114
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.70 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.4 98.9 69.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.6 3.8 2.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5ECF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-10-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
50.0 - 2.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2559 / 0.2901
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5E7X