Data quality metrics extracted from 5ec7.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EC7 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALBA BEAMLINE XALOC
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALBA
Beamline
_diffrn_source.pdbx_synchrotron_beamline
XALOC
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-03-20
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979
Software
Data reduction
_software.classification
autoPROC
Data scaling
_software.classification
Aimless (0.5.12)
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
83.472 42.348 52.579 90.00 90.47 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
19.640 19.640 1.680
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.650 8.890 1.650
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.054 0.027 0.439
  Rmeas - - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.039 0.018 0.310
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
59267 367 3116
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
21249 139 1083
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
11.70 27.40 2.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.7 87.4 96.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.8 2.6 2.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.998 0.746

Refinement
PDB entry ID
_entry.id
5EC7
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-10-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.6 - 1.650 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1908 / 0.2431
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4JZ4