Data quality metrics extracted from 5ebw.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5EBW at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 4.2.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
4.2.2
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
CMOS
Collection date
_diffrn_detector.pdbx_collection_date
2014-02-09
Detector
_diffrn_detector.type
RDI CMOS_8M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.8_1069)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 4
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
156.910 156.910 75.837 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
51.505 51.505 2.230
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.115 6.690 2.120
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.122 0.049 1.018
Rmeas
_reflns.pdbx_Rrim_I_all
0.132 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.049 0.020 0.564
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
350427 12750 20637
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
50630 1742 5593
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.80 10.40 0.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.1 99.6 73.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.9 7.3 3.7
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
5EBW
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-10-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.2 - 2.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2223 / 0.2491
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1K4C