Data quality metrics extracted from 4e6f.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4E6F at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL11-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL11-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2012-02-08
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97972,0.91837,0.97917
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE (December 29, 2011; Wolfgang Kabsch)
Phasing #1
_software.classification
SHELX (George M. Sheldrick; gsheldr@shelx.uni-ac.gwdg.de)
Phasing #2
_software.classification
SHARP (Eric de La Fortelle; sharp-develop@globalphasing.com)
Phasing #3
_software.classification
SHELXD
Model building
_software.classification
MolProbity (3beta29; D.C. & J.S. Richardson lab; molprobity@kinemage.biochem.duke.edu)
Refinement #1
_software.classification
BUSTER-TNT (2.10.0; Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement #2
_software.classification
BUSTER (2.10.0)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
49.237 89.078 52.586 90.00 105.49 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979720.918370.97917 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.449 47.449 1.540
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.490 3.210 1.490
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.054 0.028 0.546
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 23721 22139
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
69985 7051 6594
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
12.94 35.00 2.19
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.1 97.0 98.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.4 - 3.4
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4E6F
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-03-15
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.4 - 1.490 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1604 / 0.1800
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD