Data quality metrics extracted from 6e3f.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6E3F at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-E
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-E
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-08-17
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9719
Software
Data reduction
_software.classification
HKL-2000 (2.3.7)
Data scaling
_software.classification
HKL-2000 (2.3.7)
Phasing
_software.classification
MOLREP (10.2.36)
Refinement
_software.classification
REFMAC (5.8.0230)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 41 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
99.589 99.589 514.887 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97190 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 2.750
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.700 2.700
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.124 -
Rmeas
_reflns.pdbx_Rrim_I_all
0.129 -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.041 0.443
Total number of observations
_reflns.pdbx_number_measured_all
531423 -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
36912 1786
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
6.30 2.05
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
14.4 14.8
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.737

Refinement
PDB entry ID
_entry.id
6E3F
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-07-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.6 - 2.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2148 / 0.2444
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3QE5