Data quality metrics extracted from 8dxz.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8DXZ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 17-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
17-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2022-07-24
Detector
_diffrn_detector.type
DECTRIS EIGER2 X 9M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.00743
Software
Data reduction
_software.classification
autoPROC
Data scaling
_software.classification
STARANISO
Phasing
_software.classification
AutoSol
Refinement
_software.classification
PHENIX (1.20.1_4487)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
106.037 106.037 94.980 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00743 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
66.020 5.240
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
4.710 4.710
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
3146 402
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.40 -
Completeness [%]
_reflns.percent_possible_obs
87.2 -
Multiplicity
_reflns.pdbx_redundancy
10.8 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.995 0.573

Refinement
PDB entry ID
_entry.id
8DXZ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-08-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
33.0 - 4.710 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1506 / 0.1581
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD