Data quality metrics extracted from 5dxb.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5DXB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-BM
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-BM
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-08-11
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
56.013 85.939 58.272 90.00 108.41 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
27.590 2.144
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.077 2.077
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.220
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
29401 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
2.17 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.3 64.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.7 3.7
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5DXB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-09-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
27.6 - 2.080 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1770 / 0.2100