Data quality metrics extracted from 6dwe.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6DWE at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-03-10
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97926
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
HKL-3000
Refinement
_software.classification
PHENIX (1.12_2829)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
135.093 159.396 165.226 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97926 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 30.000 2.750
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.691 7.300 2.691
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.163 0.048 0.745
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.178 0.052 0.827
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.070 0.021 0.352
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
98448 5265 4648
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
4.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.3 99.8 94.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.3 6.2 5.1
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.998 0.610

Refinement
PDB entry ID
_entry.id
6DWE
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-06-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.9 - 2.691 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1555 / 0.2024
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB entry 5TCJ