Data quality metrics extracted from 6du3.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6DU3 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 23-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
23-ID-D
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-02-14
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97648
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
125.414 78.731 63.001 90.00 112.42 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97648 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.610
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.570 6.970 2.570
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.082 0.031 0.384
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
66701 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
17864 946 690
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.0 99.8 76.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.7 3.7 3.0
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
6DU3
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-06-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.2 - 2.580 Å
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given