Data quality metrics extracted from 3dso.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3DSO at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU RU200
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2008-06-13
Detector
_diffrn_detector.type
MAR scanner 345 mm plate
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54179
Software
Data reduction #1
_software.classification
DENZO (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data reduction #2
_software.classification
HKL-2000
Data scaling #1
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling #2
_software.classification
HKL-2000
Phasing
_software.classification
SHARP
Refinement
_software.classification
REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
32.193 84.672 23.662 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54179 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.610
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.550 3.340 1.550
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.043 0.042 0.129
Rmeas
_reflns.pdbx_Rrim_I_all
0.043 - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
87158 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
9911 1085 905
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
27.10 - 13.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.1 98.2 93.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.8 8.8 6.4
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3DSO
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-07-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
15.8 - 1.550 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2030 / 0.2120
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD