Data quality metrics extracted from 5dqe.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5DQE at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-06-13
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.91925
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing #1
_software.classification
HKL-3000
Phasing #2
_software.classification
PHASER
Refinement
_software.classification
PHENIX (phenix.refine: dev_1951)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
121.470 61.582 80.419 90.0 117.7 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91925 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
40.000 2.220
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.180 2.180
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
24263 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
24.00 3.14
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.4 86.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.0 3.1
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5DQE
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-09-14
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
38.7 - 2.183 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1789 / 0.2274
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3L15