Experiment | |
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Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | ROTATING ANODE The general class of the radiation source. |
Source details _diffrn_source.type | RIGAKU The make, model or name of the source of radiation. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | IMAGE PLATE The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2007-06-11 The date of data collection. |
Detector _diffrn_detector.type | RIGAKU RAXIS IV++ The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 1.5418 Comma separated list of wavelengths or wavelength range. |
Software | |
Data collection _software.classification | CrystalClear The classification of the program according to its |
Data reduction _software.classification | CrystalClear The classification of the program according to its |
Data scaling #1 _software.classification | d*TREK (Jim W. Pflugrath; Jim.Pflugrath@Rigaku.com) The classification of the program according to its |
Data scaling #2 _software.classification | SCALA (3.2.25; 21/9/2006; Phil R. Evans; pre@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Phasing #1 _software.classification | MOLREP (Alexei Vaguine; alexei@ysbl.york.ac.uk) The classification of the program according to its |
Phasing #2 _software.classification | CNS The classification of the program according to its |
Refinement _software.classification | CNS (Axel T. Brunger; axel.brunger@yale.edu) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 21 21 21 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 73.897 Unit-cell length a corresponding to the structure reported in 100.226 Unit-cell length b corresponding to the structure reported in 186.630 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 90.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 1.54180 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
---|---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 93.315 The largest value in angstroms for the interplanar spacings | 40.490 The highest value in angstroms for the interplanar spacings | 2.420 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 2.300 The smallest value in angstroms for the interplanar spacings | 7.270 The smallest value in angstroms for the interplanar spacings | 2.300 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.102 The R value for merging intensities satisfying the observed | 0.046 The value of Rmerge(I) for reflections classified as 'observed' | 0.390 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas | - | - | - |
Rpim | - | - | - |
Total number of observations _reflns_shell.number_measured_all | - | 14997 The total number of reflections measured for this | 40927 The total number of reflections measured for this |
Total number unique _reflns.number_obs _reflns_shell.number_unique_all | 62202 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 2055 The total number of measured reflections which are symmetry- | 8942 The total number of measured reflections which are symmetry- |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 6.60 The mean of the ratio of the intensities to their | 9.90 The ratio of the mean of the intensities of the reflections | 1.90 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 99.7 The percentage of geometrically possible reflections represented | 95.2 The percentage of geometrically possible reflections represented | 99.6 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 6.5 Overall redundancy for this data set. | 7.3 Redundancy for the current shell. | 4.6 Redundancy for the current shell. |
CC(1/2) | - | - | - |
Refinement | |
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PDB entry ID _entry.id | 3DP3 |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2008-07-07 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 15.0 - 2.300 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.2030 / 0.2310 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | 2GLL |