Data quality metrics extracted from 5doq.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5DOQ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-12-01
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.738290
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing #1
_software.classification
SHELX
Phasing #2
_software.classification
PHENIX
Refinement
_software.classification
REFMAC (5.8.0073)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
110.06 120.86 122.72 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.73829 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 3.120
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.050 3.050
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.099 2.200
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
18373 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
19.17 3.03
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
56.7 2.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
31.4 19.1
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5DOQ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-09-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 3.050 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.3194 / 0.3347
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD