Data quality metrics extracted from 3dnz.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3DNZ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID14-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID14-2
Temperature [K]
_diffrn.ambient_temp
110
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2007-05-15
Detector
_diffrn_detector.type
ADSC QUANTUM 4
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.93
Software
Data reduction
_software.classification
MOSFLM (Andrew G.W. Leslie; andrew@mrc-lmb.cam.ac.uk)
Data scaling
_software.classification
SCALA (3.2.25; 21/9/2006; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Refinement
_software.classification
REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
92.535 92.535 128.628 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.93000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
80.137 38.260 1.250
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.198 3.740 1.180
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.225 - -
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 21695 6073
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
89255 3705 4632
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
3.10 10.30 0.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
84.0 99.6 30.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.4 5.9 1.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3DNZ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-07-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
68.0 - 1.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2400 / 0.2670