Data quality metrics extracted from 1dnx.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1DNX at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU RU200
Temperature [K]
_diffrn.ambient_temp
123
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
1999-04-22
Detector
_diffrn_detector.type
RIGAKU RAXIS IIC
Software
Data reduction
_software.classification
d*TREK (V.4.7)
Data scaling
_software.classification
d*TREK (V. 4.7)
Phasing
_software.classification
X-PLOR
Model building
_software.classification
X-PLOR
Refinement
_software.classification
SHELXL-97
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
26.188 41.944 43.323 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
20.000 1.760
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.700
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.079 0.228
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
5659 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
47.30 17.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.3 94.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
10.1 7.1
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
1DNX
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
1999-12-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1950 / 0.2430